Gene detail

Detailed information of ANN10908-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:21293761...21299342
NR annotation: CAH3153608.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PUR6	GPN-loop GTPase 2 OS=Danio rerio OX=7955 GN=gpn2 PE=2 SV=1
D4A7C0	GPN-loop GTPase 2 OS=Rattus norvegicus OX=10116 GN=Gpn2 PE=3 SV=1
Q58DD9	GPN-loop GTPase 2 OS=Sus scrofa OX=9823 GN=GPN2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001940 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03029 all species →	ATP_bind_1	Conserved hypothetical ATP binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004130 all species →	Family	GPN-loop GTPase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030231 all species →	Family	GPN-loop GTPase 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21231 all species →	XPA-BINDING PROTEIN 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24104	GPN; GPN-loop GTPase	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.