Gene detail

Detailed information of ANN11005-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:23112950...23129187
NR annotation: CAH3035361.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O75486	Transcription initiation protein SPT3 homolog OS=Homo sapiens OX=9606 GN=SUPT3H PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02269	TFIID-18kDa	Transcription initiation factor IID, 18kD subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003195	Family	Transcription initiation factor IID, subunit 13	Interproscan
IPR009072	Homologous_superfamily	Histone-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11380	TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0043966	Biological Process	obsolete histone H3 acetylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11313	SUPT3H, SPT3; transcription initiation protein SPT3	-	Chromosome and associated proteins	ko03036	deepkoala