Detailed information of ANN11049-RA in Nanomia septata

Genomic Location: chr5:20053093...20053802
NR annotation: XP_047129261.1, tryptophan--tRNA ligase, mitochondrial-like [Hydra vulgaris]
Species Nanomia septata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R9X8Tryptophan--tRNA ligase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=trpS PE=3 SV=1
Q97LD6Tryptophan--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) OX=272562 GN=trpS PE=3 SV=2
Q92HR1Tryptophan--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=trpS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004173 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579
all species →		tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR050203
all species →		FamilyTryptophan--tRNA ligaseInterproscan
IPR002305
all species →		FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR002306
all species →		FamilyTryptophan-tRNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43766
all species →		TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004830
all species →		Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005759
all species →		Cellular Componentmitochondrial matrixInterproscan
GO:0006436
all species →		Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0070183
all species →		Biological Processmitochondrial tryptophanyl-tRNA aminoacylationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN11049-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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