Detailed information of ANN11488-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:32134021...32168011
NR annotation: XP_015773000.1, PREDICTED: rho guanine nucleotide exchange factor 5-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5BKC9Ephexin-1 OS=Rattus norvegicus OX=10116 GN=Ngef PE=1 SV=2
Q8CHT1Ephexin-1 OS=Mus musculus OX=10090 GN=Ngef PE=1 SV=1
Q5RDX5Ephexin-1 OS=Pongo abelii OX=9601 GN=NGEF PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR047270DomainEphexin-like, PH domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR047271FamilyEphexin-likeInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12845GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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