Gene detail

Detailed information of ANN11882-RA in Montipora grisea

Genomic Location: Scaffold_5__1_contigs__length_50351834:35005009...35034507
NR annotation: XP_044184490.1, myotubularin-related protein 13-like [Acropora millepora]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN11882-RA

ATGTCCCGTCTAGCAGATTATTTTGTCGTTTGTGGAATAGACAGGGACTCAAAGAACGACGAAGTGAAAGGGAAGGTAATTCAGCGTTTTCCCAAGAAAGCCCGAAAAGATGCAACCTTCCCGGAGGGAATTGAATTGTTTTGCCAGCCTGGAGGATGGAACTATTCCTTCTACTGCAAGCCACCAACGTTCTTTGTGGCAGTTCTTACTGATATGGAGGGGGACCATCGATACTGTGCTTGCTTCACATTCTATGAAAAATGTAGTCAAACGAAGCCTAAGTCAGCGGGAGCATTGAAGCCGACAAGCAAGGATGCAGCTGTGGATGGCAGCCAATCTGATTCATCTATGTCTGACAAGCGTGGCTCTGACAATGTGCCTGGCATTTCTGTTAATAGTGGTGAATTAGCACTGGATAGGTTTGCACCAAAATGCTTGGTTCTTGTTTCGAGAGCAAATTATTTTGAAGTGTTTAAGAACTGCCTTACAACCATCTATTTATCATTCCTGTCTGGTAACACCAAATCTTTAGAAGGATTAGTTGGCTGCATTTTGGGCTTTGTTCAAGTGCCTCCTCCTGGTGGACCAAAGATGACATTTTCCATGGGAGCTGGTGATCGGCAGACTCTGTTACCCCCGGTTTCAGATACCCTTCCAGTGACTGGCAAATCAGTTGCTATCCTGTTCAATCAGCTAGGCAAGTTGTCAAGTTATCATACCAATGCACTCATAGGGAAATTATTGCTTTATAGTATCCACAATATGTTGGCTCTTTTCTGTGCCGTCTTGACAGAAAACAAGATAGTGTTCTACTCAAGCAGTTATTCGCAGTTGACTCATGCCACCCAAGCTATGTTAGCATTGATGTACCCACTGAAGTTTAGTTATGTTTTCATTCCAATTTTGCCTGCTGCACTGCTTGAGTTCTTGAATGCACCAACACCATACATCATGGGAGTTCATGAAGGTTACAAGGATATCGCACCTGACTTGGCTGATGTTATCCTTGTGGATATTGATGGAGGACACATCTTCATCCCAGATACCATCAACCTTGCTTCGTTGCCTGAACCATTCTTAGGCCGAACAAGGCATGAATTAACCTTGGTATTGCATCCTCAACTTGTTACAGCAGACTGTGCCTTCCAGACATCAACCTCTCCTTCACTTCCAGTGCTTCAGGACAAGGAATTGCGTGCAGTGTTTATACGACTGCTTGCTCAAATGTTTTCTGGCTATCGATCTTGTCTGACTTTGATCAGAATCCATCCCAAGCCTGTTATAACATTTAACAAGGTTTCATTCCTTGAGTATAGAGGCATGGTGGGTGATGCATTTTTGTCCAAGGTTTTGGACAGCATTTCATTTCTCTCATTTGTCGCATGCCGTGGTCCTCCTTATAGAGCATGTGATCTGTTTGACCAGTTATCTGTAGAAATTGACGGTATTCTGAGTACAGAAGGAGGATTGGATGCTGAGGTTCAGGCCAACATTCAACAGCTGGCACAGAAGCTTTATGACAATGAACCTTCTGGTGATACAGGGGAAAATGCAATCCAACCGTTGGATCCATCTATCGAAGCCGAATTGTACAGCAAACTAGTCTTTCCTGAGCTCAGTGAATCCGAAATCGGCCAGTATATTGATCAAGCAGAGAATGTTGCTGCCCCCTACAAAATCAAAAGCCCAGAGCCGTGTGTTGTGCCTTCAACTGTTGTTTCAAACCGCCAACAGCATTACATTCCAAGTCGCAAGCTTGAGGTGTTAAGAGACTGTGTTGCGTACATTTTTGATAACAAGATATCTGAAGCGAGAAAGACCCTTCCATCAGTGGTCCGAGCACTGAAGTCCAAAGGAGCCCAGTTAGCTCTGTGCCATGAACTTTCTCTCAGAGTTAAGCAGAACAGATCAATGTTGGAACATGACCAGTTTGATTTGGTTGTAAGACTCATGAACAGTGCATTGCAGGATGATGCTAGTATGAGTAATACAGCAGTTGCTGCAGCACTTCTACCTCTTACAGCCACATTCTGCAGGAAACTCAATGCTGGTGTAATTCAGTTTGCTTACACTTGCGTACAAGATCATCCAGTTTGGGAGCGACAGCAGTTCTGGGAGGAGGCATTTTATGCTGACGTAGAGGCACAAATCAAACAATTGTATGTTGATGAAGAAGCCCCCAAGGCAAATGCTGAAGATACCTGTGATAGAGCCCAGCAGCGCATTTCACGTGTCAGCTTAACACCTCTGACCAAGCACCGTAGCTTCTCGAAAAGCAGGGATAACATTTCATTGTCAGCTAAGGAGTCGGGGAGCTCCAGTGATTTGGATAATACTAGCACACAAGAAGAGCAAAAGTCAGTTCCAAGTGCACTTAGCATTGCTGCTAAGCAGCTCAAGAAATGGCCTCACTACAGCAAGATGGAGAAAGACGCCAAGATAAACAGCGAGGAAGGCATTGTGTACAGTCAGGCAATACATTATGCAAATCGCATGGTTTACATGAGAATACCATTGGATGCAAGTGAGAAAATGCCTCAGCCCAGCCCGGCACCAGCAACAGGTTTGGCCACTGCCGATGGTGATGAATCCATAAATGGTACCTACATGGGGAGCATGGTGAATGGTGTTGGTGGTAGATACTTGCTTGGGACTGAGGCCAGGTTGGATAAGTGTTCTAAGGAAGTTGCTTTCCCAAGCATGAAATCTACTTGTCCCAGACAACAGGCCCCAGTTGTTCAAAAAGTGGATAACCATTATCCACCAGATAAATCACCAATCATTGTGAGCAGTGAAGTGGGTAGTTGCATAACAGACAGTGGAGGATGGGAAAATTACATGGATGATGAAGATGGTGGAACCATTGCTGACCAAGTCACAAGATTTGTCAGTCGATTTGTGGACAGAGTCGGCACAGAAGCAGGAATCAGTCAAGAGCACTTGAAGTCTCTTTACGCAATGATTCCTGGAGTGGTTACTATGCACATAGAATCACTGGAGCCAGTGTATCGTGAGTACAAAAACCTGGCTCCTATTCAAAAGGCCAAGATCATGAGACCAGCATTGTTGCAAGGAGAGGAAATGCTTAGTGATGGACTGCGTGCATACCTTGTACATGATGGCCGCGATCTAGGGAAGGGAGGTGAACTTGGAGGACCTTGTCTGTTACCAGCAGATGGTGCTGTGTTCTTGACGAATTACAGAGTGATCTTCAAGGGGACACCAGTTGACCCATTTGCTTCTGAGATGATTGTGACAAGAAGCTTTCCTGTTGGTTCGCTGGTCAAAGAAAAGAAGATTGGAGTGCAGTATCTTCAGCACTTGGAACTATGGCTTCATGAGTGTGTACAGCTGAGATCAAGCACTTTTCAGATTATGAAACTTGTTTTTGATGAAGAAGTTGAACAAGAAGCTATTGAGTCATTTCGAAAGAAACTTCTGAAAAGGCGTTCACCCAACACAATATTTGGATCATTTGCATTTTGCGGCAAAGGTATTGCTAGGACGCCAACTTTTGTCATTCAGAAACACATGGAGAGGCAAGGAACTCTTAAAAAAACAAAGAACAAACTTGTAAGTGCGTCAAGGAGCAAGACAAGCCAACTAAGGGGCTCTCTTCGGAAAAGAAAACATAGGCACATTGATTCAAATGGTTTAGAGACTAGTCGATCCCCAAGTGGATCATTGACAACGGATGATGATGATTCTGTTTTGGACATCAATGAAATTCCTGTCAAAGTAGAACCTGCTGTTGTTCAAGGCGTTGAGAGACTCAGCAAGTTGTCTTATTGTGGGGATTATGCTCGGCTTAAGTTAGGGAACATTGAGAAGGATTCATCTGTGGGGCCTTGGAGGATATGCATGGTGAATGTAACATACACGGCTTGTCGCAGTTATCCTTCGGTGGTGGTTGTACCACAGAGCATCTCAGACGACAGCATTCTAAGAATAGCTAAAAATCACCGCCAAGGACGATTCCCTGTTGCTGTATGGAGACATCAGCGAAACAAAACAGTATTGCTAAGAGCTGGAGGCATTGAACGAAGCACAATAGGATCAATTATGAGACAGACCAAGAATGTTGGTGGAGGGCATGTTACAAGTAATGCTATATCTTCATCTGCTTCAGTTGAACAAGAGAAATACTTAGCTGCTGTGGTGGCAGCCACACCCTTGAGCAGAAATAAGAATATCAAACGCGATAACTCTCTACACCAAGGAATTATTCTGCGAGATGAAATTTTTGCTGACCAGGTCAACAGTGACCAACTTTTAGACAAGACCATTTTGAAGAAAGGTTGGGAGTCTGCCGCATTGTACATCTTTGGTGACAAGTCATTGTTACGGAATGTAAAGCAAGAGGCTTATCCAAAGTGTGAATTTATTCCGATTGAGCTCCCTGACATTCGTGCAGTGAGAGCAAGCTTCAAGAAATTTCAGCGAGCAACTTGCCCCAGTACAGAAACAAGCTCTAGCTTTATTCAGCAAGTTGAAGAGTCAGAGTGGCTTCAGCAGGTAAGCATTGTGAAGGAACATTACATCAAGCTGTCTGCGGTCATGACTGTGGCCAACTGTCTTGTTGATCTCATAGACATCCAATGCTCTTCTGTACTTGTCTGCTTTGAAGATGGCTGGGACACCACGGCACAGGTGCTTTCACTAGCAGAAATCATGTTGGACCATCACTACCGCACCATAGATGGCTTCAAACTTTTAATTGAAAAAGAGTGGCTTTCATTTGGGCATCGATTCACACACCGTGGAAATCAAATTGCCTCAGCACTGGCTGGCTTCACACCAATATTTCTGCAGTTTCTGGACTGTGTTCACCAGATAATGCTTCAGTTTCCACTGTCTTTTGAATTTAATGATCACTTCTTGAGCACCATTGCATACCATCACGTGTCAATGAGATTCCGCACCTTCCTCCTGGATTCAGAGCATGAGCGATCTGAGTCTGGTTGGATGACTGAAGAAGAAAGCAAGCCAAGAGGAAAATCATTGTGGGATTACATGGACATGCAAAAAACTAGATCACCTCTCTACTACAACTTCCTGTATTCACCTGACCAGCATAAGGTACATGTCAAATTAGAGGTTTCGTTGTTGTAA

Transcript

ANN11882-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86WG5	Myotubularin-related protein 13 OS=Homo sapiens OX=9606 GN=SBF2 PE=1 SV=1
Q6ZPE2	Myotubularin-related protein 5 OS=Mus musculus OX=10090 GN=Sbf1 PE=1 SV=2
E9PXF8	Myotubularin-related protein 13 OS=Mus musculus OX=10090 GN=Sbf2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002855 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02141 all species →	DENN	DENN (AEX-3) domain	Family	Interproscan
PF06602 all species →	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF02893 all species →	GRAM	GRAM domain	Domain	Interproscan
PF12335 all species →	SBF2	Myotubularin protein	Family	Interproscan
PF03456 all species →	uDENN	uDENN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR005113 all species →	Domain	uDENN domain	Interproscan
IPR001194 all species →	Domain	cDENN domain	Interproscan
IPR010569 all species →	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan
IPR005112 all species →	Domain	dDENN domain	Interproscan
IPR004182 all species →	Domain	GRAM domain	Interproscan
IPR022096 all species →	Domain	SBF1/SBF2 domain	Interproscan
IPR030564 all species →	Family	Myotubularin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10807 all species →	MYOTUBULARIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN11882-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.