Detailed information of ANN11929-RA in Montipora grisea

Genomic Location: Scaffold_5__1_contigs__length_50351834:36479135...36480436
NR annotation: XP_015777802.1, PREDICTED: TNF receptor-associated factor 6-like isoform X9 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B6CJY4TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1
B6CJY5TNF receptor-associated factor 6 OS=Macaca mulatta OX=9544 GN=TRAF6 PE=2 SV=1
P70196TNF receptor-associated factor 6 OS=Mus musculus OX=10090 GN=Traf6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR012227FamilyTNF receptor-associated factor TRAF, metazoaInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0031663Biological Processlipopolysaccharide-mediated signaling pathwayInterproscan
GO:0032813Molecular Functiontumor necrosis factor receptor superfamily bindingInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0045087Biological Processinnate immune responseInterproscan
GO:0051092Biological Processpositive regulation of NF-kappaB transcription factor activityInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

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