Gene detail

Detailed information of ANN12066-RA in Nanomia septata

Genomic Location: chr5:84853418...84854404
NR annotation: XP_047132384.1, tRNA-splicing endonuclease subunit Sen54 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8C2A2	tRNA-splicing endonuclease subunit Sen54 OS=Mus musculus OX=10090 GN=Tsen54 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12928	tRNA_int_end_N2	tRNA-splicing endonuclease subunit sen54 N-term	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024336	Domain	tRNA-splicing endonuclease, subunit Sen54, N-terminal	Interproscan
IPR036740	Homologous_superfamily	tRNA intron endonuclease, N-terminal domain superfamily	Interproscan
IPR024337	Family	tRNA-splicing endonuclease, subunit Sen54	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21027	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000213	Molecular Function	tRNA-intron endonuclease activity	Interproscan
GO:0006388	Biological Process	tRNA splicing, via endonucleolytic cleavage and ligation	Interproscan
GO:0000214	Cellular Component	tRNA-intron endonuclease complex	Interproscan
GO:0000379	Biological Process	tRNA-type intron splice site recognition and cleavage	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15326	TSEN54; tRNA-splicing endonuclease subunit Sen54	-	Transfer RNA biogenesis	ko03016	deepkoala