Gene detail

Detailed information of ANN12123-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:42593264...42596688
NR annotation: XP_020607297.1, signal peptidase complex subunit 1-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3T134	Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1
P83362	Signal peptidase complex subunit 1 OS=Canis lupus familiaris OX=9615 GN=SPCS1 PE=1 SV=2
B0FWK4	Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009369 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06645 all species →	SPC12	Microsomal signal peptidase 12 kDa subunit (SPC12)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009542 all species →	Family	Signal peptidase complex subunit 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13202 all species →	MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005787 all species →	Cellular Component	signal peptidase complex	Interproscan
GO:0006465 all species →	Biological Process	signal peptide processing	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0045047 all species →	Biological Process	protein targeting to ER	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12946	SPCS1; signal peptidase complex subunit 1	EC:3.4.-.-	Protein export	ko03060	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.