Gene detail

Detailed information of ANN12195-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:44172423...44177752
NR annotation: CAH3113177.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN12195-RA

ATGTCATGGGCTCGAAGCAGCAATGGTCATATTGCAAAGAAAGCTCGTGTTGAAATTGACCCACCTCAATTGACTGAACGCCTCCCATCCATGCAAGATGTTGAAACAACAACAAAGAGACCGGATGAGGCTTCTCTTCCTGTTGATTTTCTGTTGCTGACGGTTAAAGATTGTGAGTTCTTGGCTTGTTACAGGCAACTGATCAATCCCTTTAGATGTTGGTATGACAACATTGGCTTCGTGTATTTTGAGAACACAGGGGCCAGTAACAAAGTGAAAGTGGCCTTAATACGTTCGAATGAGGGCTCCAGTGGTCCTGGTGGTGCTTTGATTACCGTCAAGAATGCTGTACCTATGCTTCGACCAAAGGCTGTCATTTCAGTGGGAACCTGCACTAGTCTCAATCCCGAGAAAGCCAAGCTCGGCGACGTTGTTGTTTCTGCAAAATTAAAAGAACTGTCAACTGGCATGCGAAGCTATGTGAGTAGACGGTTTCTTTACGTTATCAAGCATTCAGCTGATGGTTTCAAGGCTCCTCTGAAAAATCCCCAAGCTCACGAACCCAATGTCCATTGTGATGGTGAATTTCTGAGTGGCCCAGAACTGGTCAGCGCTGAATCGCGTCGTAAGGAGCTTGCTGAGTCCAATCCTCAAGCAATTGCTATTGAAAGGGAAGGAGAAGGTGTTTTTACAGCAGCATTTGATGATCAGATTGAGTGGCTCATTGTCAAAGGAATAGCTGATTATGCAGACGGCGCCGAGACAACGACAGAAAGTTGGAGTCCTTTTGCTAGTATGATGGCAGCTTCTGTTTTAGCACACATTCTGAGGGATCCTGGTGTTTTCCGCACGTGGCCACACTATGAAGATACGTCATATCCAACGTACATTATAAAGAGTATCCGCCAGCTTAACAAAACCTGTGAAGAAAGGCTTTTGCCAGTTCCTTGGTGTGAAGACTTTAGCTTCCATCTGAACGACATTTTCACAAGGCTAAAGATTGTTGGCAAAGAAAAGACACGAGGAACATTAACTGATGAAATCACCAACATGACAGCTATCTTCAAAGCTCACAAAGATTGTCAAACGCCACGAACTGTGCTGATCGAGGGCGATCCTGGCATGGGAAAAACGACCTACTGTCAAAAGCTGGCTTATGATTGGGCAACTAAACAAGATGAATGGGACGAGTCTTTCCCCGAGACTGATGTGCTGTTGCTTTTAAGATGCCGTGATATCGAATCATCTAGCGTTAAGGAAGCCATTGAAGATCAAATTCTCCCTTACGATGTAAACAAAGAAGCTAAAGAGGTTTTCTTTCAATTTATCAGCGAAAATCAGCTTAACGTTCTGTTAGTACTCGACGGAGTAGATGAAGTGGATGCCAGTAAACAAGAAATGATTGAAAATCTTCTTAAAAGTAAAGAGTTTGCAAATTGTCGCATTGTTCTTACATCTCGTCATGAAGCCGGAAAGAAAGTAAGACGATACTGTGACACGCTGTGGGAGATTGTCGGGTTTACCAAAAGACATGCACAGAGTTTCATACTAAAGTACTTCAAGAACATAGACAAGGAACACTTGGCTGACAAGCTTTTAGAGCAACTTTGGCCTTCCTTTTTAAGATATGATTTCGAAAACGAAGACGAAGAAGATTCCGATACATATTCATGGTATAGGTCTCGTTCTGATGACACGGCTGTATTAAGTGACTTAAGGCAACTGACAAAAAACCCTCTCAACACAGCTTTACTCTGTATTCTTTTTGAAGATTTCGATGGCATACTTCCCAAGAATCGAACTCAATTGTACATTGAAATTGTCCTGTTTGTTTTGAGAAGATTCGAAAGAAAGAACGGATTGTCAAGCAACAGTGAAGATCTTATATCAGTTTACAAAAAGGAACTGATATATCTTGGACGTATGGCCTTTCAAGCTCTTCGTAAAGGGGAATTAGATTTCGAAGAAAACGAATCTGGTGACGCTATTTTCAGTCTTTTAATCAAGTTTGGATTTTTGACAATCCAGGCAGGTGGTAGTAAGAGGAAACCTTGTCTTCGTTGTGGTTTTTTTCACAAGAGCTTTCAGGAGTTCTTTTCCGGCCTTTATCTCGCGTTTGAGATTAACGACGAAGATATTAATTATTTAGTGACTCATAAAAGATATTTGGCTGAACTAAAAGAAGTGTTCCTGTTCATGACTGGAATTGCAGCCTCCCATTGTGAAGAAACAGCCGTTTGTGTTGTAAGTAGGGTAGCTTCATTAGTTAATTTGTTTTGTCATCATTCTGGTAAGGTTAACTCATATCTGCAATTCGCCTTATACTGTATATCACAGTGCACAAACCATCAGGAAAACCTCAAGTCCCGAATGGTTGATACATTAGGTAGGAACCTTAACATCAAAAATTTAGCAACGGAACATAATATCCAACTTACTGAGCTATTATTTGAAGTTGTGGGAGCAAACTCCTCCCTAACGCATTTGGATTTGAGTTTCAACAGTATTGGTGATACTGGTGCTGAATCCCTTTCCCAGGCCCTCAAAGTAAACTCCTCCCTGACTAATTTGGATTTGAGTGACAACAGTATTGGTGATACCGGTGTTGCATCCCTTTCCCAGGCCCTTACAGTAAACTCCTCCCTGACTAATTTGAATTTGAGTTTCAACAGTATTTGTGATACTGGTGTGGAATCCCTTTCCCAGGCCCTCACAGTAAACTCCTCCTTGACTAATTTGAATTTGAGTTTCAACAGTATTTGTGATACTGGTGTGGAATCTCTTTCTCAGGCCCTCACAGGAAACTCCATCCTGACTAACTTGGATTTGGGTAGGAACAGTATTGGTTATAGTGGTGCAGAATTCCTTTCCCAGGCCCTCACAGTAAACTCCTCCCTGACTAATTTGGGTTTGAGTCACAACAGTATTGGTGATACCAGTGCTGCATCCCTTTCCCAGGCCCTCACAGTAAACGCCTTCCTGACTAATTTGAATTTGAGTTTCAACAGTATTGGTGATACCGGTGCTGAATCCATTTCCAAGGCCCTCACAGTAAACTCCTCCCTGACTAATTTGGGTTTGAGTCACAACAGTATTGGTGATACCGGTGCTGCATCCCTTTCCCAGGCCCTAACAGTAAACTCCTCCCTGACTGATTTAAACTTGGGAAGGAACAGTATTTGTGATACCGGTGCCGAATCCCTTTTCCAGGCCCTCGCAGTAAACGCCTCCCTTACTAACTTGAATTTGTTTGGCAACAGTATTGGTGATACCGCAGCTGAATCCCTTTCCAAGGCCCTCACAGTAAACTCCTCCCTGACTAATTTGCATTTGGGTGGGAACAGTATTAGTTATACTGGTGCTGAATCCCTTTCCAAGGCCCTCACCCCTCACAGTAAACTCCTCCCTGACTAA

Transcript

ANN12195-RA

Protein

Uniprot

Uniprot term	Description
A0A386CAB9	NACHT, LRR and PYD domains-containing protein 1 homolog OS=Danio rerio OX=7955 GN=nlrp1 PE=1 SV=1
P59046	NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens OX=9606 GN=NLRP12 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF01048	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR000845	Domain	Nucleoside phosphorylase domain	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46312	NACHT DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11643	CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4	EC:5.6.2.-	Chromosome and associated proteins	ko03036	deepkoala