Detailed information of ANN12237-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:44956492...44961684
NR annotation: XP_020608242.1, matrilysin-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P22757Hatching enzyme OS=Paracentrotus lividus OX=7656 PE=1 SV=1
P9195350 kDa hatching enzyme OS=Hemicentrotus pulcherrimus OX=7650 PE=1 SV=1
O77656Collagenase 3 OS=Bos taurus OX=9913 GN=MMP13 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00589Phage_integrasePhage integrase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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