Detailed information of ANN12296-RA in Nanomia septata

Genomic Location: chr5:100118549...100217257
NR annotation: XP_052105775.1, SCO-spondin-like [Mytilus californianus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C3YWU0Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV=2
Q99KR8Plasma alpha-L-fucosidase OS=Mus musculus OX=10090 GN=Fuca2 PE=1 SV=1
Q6AYS4Plasma alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF01120Alpha_L_fucosAlpha-L-fucosidaseDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR000933FamilyGlycoside hydrolase, family 29Interproscan
IPR000998DomainMAM domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR016286FamilyAlpha-L-fucosidase, metazoa-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004560Molecular Functionalpha-L-fucosidase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006004Biological Processfucose metabolic processInterproscan

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