Gene detail

Detailed information of ANN12461-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:49277850...49291874
NR annotation: CAH3016229.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN12461-RA

ATGAAATTGCAACTTTCCAAAGACAAATCTTCTAGTCAACAAAAGTTTAGGTCACTTATAGCTCTAGAAACCCAGTTCAGATTGCATGCCTCTTACCGAATGTGTGATGAGCCCAAGAGCCCCTTTTTGGAAGAAGTATCAGTTCAGTTTACAGTGGACAAGAAAGAAATGGAGGAAAGACACACGCTTGTCCAGAAAATGGAGGATCTGAGCGGTAGCTTGGGAAGGAGGACACTTGATGACCCAAGTGGGTTGGTGATGGAAGGCTACTTGTTTAAACGCAGTAGTAATGCCTTCAGGAGTTGGCATAGGAGATATTTTACAGTGCAGAATAATCAGCTGATGTACCAGAAGCGATTAAAGGATGACCAAACTGTACTTGCTGAAGACCTAAGGCTTTGTAAAGTGAGGCTTGCAGAGGAGGCAATAGAAAGACGATTTGTCTTTGAGGTTGTTTCACCAACAAAGTCATGGATTCTTCAAGCTGATAGTGATTCCTTGAGAACTGAATGGATGGAAGTCATGCAGGCCAGTATCAACAAGGCTTTCAACAGTACAGCAAAAGGCGAAACAGATAGCAGTGAGTCCGATTCACTGGGCTCAGGCTTGAAGAGTAAGAGTGTGGAGTCCTTAGACAAAATTTCTCGACCGAAAAGTATTCTGGAACAAATAAGATCCGTTAGTGGTAATGACAATTGTGCTGACTGTGGAAGTCCTGATCCATCCTGGGCAAGCACCAACTGGGGTGTTGTGCTTTGTATAGAGTGCTCTGGAATTCATAGGAGTTTGGGTGTTCATGTGTCTAAAGTACGATCACTCACCCTTGATGCCTGGGAACCAGAGCAGATTAAGTTAATGACAGAATTGGGAAATGAGTTAGTCAATGGAATCCTGGAAGCCAAAGTTGATTCTACAAATTCGAAGAAACCCACCCCACAGAGCAGCAGAGGAGAACGAGAAGCTTGGATCAAAGCAAAATACTCACAACACAAGTTTGTCTCTCTGGAAACCTTTCTTTCCAAGTGTCAGAGACTAGACAAAGGAATTATTAAAAACTTGGCCAGGATGAAGGTTTATCATGAGCAGAAAGATCAGGCACCTGAAAGAACTAACTCAAAAAGGAGCAAGATATTTAGAAGGAAACTTGCCCTTAAGGGTCATAAATCTAAAGTAGACCACAGAAAAAGTGCCCCTCCAAACATGCTGTTATCAGATCTCACAAGTAAAGACTATGAAAACTTAGAAAAGCTGGCATCTAGTTATCTTGAACGCAGTAACGATGAAACAGCTAGCAGTGATTCCCATGATGAAGGAGCATCAGAGGGCGCGTCACAGAAAGGGTCTGTTGATGGGAATGGAAGACCGCGAGCAGCTTCTGTTAGTCATGTGAGGTCTTTATCATTTGATGAGGGTAGAGACAGAGGGGATTCTTTAGATTCCACACTGAGTGATGATGGACAAATAGCTGAGGATAATGGCGAGAGTGAGATTGACGAGGAGAGAAGTTTGAAAGAAGACAAGGAGAAAGCTATCGCTGTGCTGAAGAGAATTCACCCAAGCAGATTACTGTTCAAAGCAGCAGAATGGAAGAGCCTTCCTCTCATGGCAGCATCACTAGCTGAAGGTGCAAAAGTGAACTGGGTAAATGAAGAAGATGAGTGTAAAACAGCTCTTCATCAGTCCATCCTCGGGGGGTCATTATCAGCTTGTGAGTTTCTGTTACAAAATGGTGCCAAAATAAACCAGAAGGACAAGAGAGGGAGGGGTGCACTGCATCATGCGGCTCTCTTAGGACAGACAGGTCCGACCCTTTTGTTCTTGAAACGAGGAGGTAATCAACATGATGTTGACGAGAATGGAGAGGATCCTCTTACCATTGCAGTAAAACGGATGCATGCAGATATAGTAACCTTGTTAAGGCTTGCAAGACTGAATGAGGAAATGAGAGAAAGTGATGAGATTAGTCAAGGCGATAACACATTCTTTGATGTCTTCAGAGACTTTTCCAACATGGCATCTAAAGAACCAGACAGGCTAAAAAGAAACTTTGATTCAAAAGATCCAGACAGGCAGACAACAGTGTGA

Transcript

ANN12461-RA

Protein

Uniprot

Uniprot term	Description
Q5ZK62	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ACAP2 PE=2 SV=1
Q6IVG4	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Oryctolagus cuniculus OX=9986 GN=ACAP2 PE=2 SV=1
Q15057	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ACAP2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF01412	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001164	Domain	Arf GTPase activating protein	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR037278	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR045258	Family	ArfGAP ACAP1/2/3-like	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR038508	Homologous_superfamily	ArfGAP domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23180	CENTAURIN/ARF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12489	ACAP; Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein	-	Exosome	ko04147	deepkoala