Detailed information of ANN12511-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:50263794...50272528
NR annotation: XP_029209717.2, tumor necrosis factor receptor superfamily member 16-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000837 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00531
all species →		DeathDeath domainDomainInterproscan
PF00020
all species →		TNFR_c6TNFR/NGFR cysteine-rich regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001368
all species →		DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR000488
all species →		DomainDeath domainInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR052459
all species →		FamilyTumor necrosis factor receptor superfamily decoy receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23097
all species →		TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN12511-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP