Gene detail

Detailed information of ANN12659-RA in Montipora grisea

Genomic Location: Scaffold_6__1_contigs__length_51879999:17883154...17885402
NR annotation: PFX27144.1, Alcohol dehydrogenase class-3 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN12659-RA

ATGTCTGCTGAGGAGTTGATGAAAGACTTGGAAGAACTGACCAAGAAGTATGAAGAAGCTATGGAACAACTCAAGGCCATGAAAGAATCTCCCCCAGCGTCATCAACCTCATCAGCGACATGCAGTGCCGTTGGACAGAAGCAGATTGTTGTCTTTCCTCGAGATAAGAAAATTAAAAATTTCACTGGAAGGAAGACAGAAGGTGACCAGCAGGTCGAAGACTTTATTGATGAATTGAAGACTACCTTTGAGGCAAGAGATATGACTCCAGCTGAGAGAGTGGACTTCATAATGTCTCATCTGGAGGGGCCAGCCAAGGAAGGAGTGCGAATGTACAGCAAGAAAGAGAGAAGTAATCCAGACTTTCTCCTGGAAGTTCTTACACAAGCATTTGGTGAGAAACGTTCAAGCTCCCAACTCCTGAAGCACTTCTATGAGTGGAGGCAGAAGGAGAATGAAACACTTCGCGCATACTTGTATTCCTTAAATGAACTACTCAAGAGCGTAACAAAAGCAGACCCAAAGGCAGTCCCCGACCCTGAGAAGACTCTGTGGGACCAATTTGCAGACGATGTGAGGGATCCTTTCCTTCAAAAAGAACTGAAGAAGTTCATCAGGGAGCGAAACCCATCGTTCTTGGATTTGAGGGAGGAGGCTCTACGCTGGTCAGAAGAGAAGGAGAGACCACAGCGAAGCACGCCTAGACCCCCACTATCCCAAGAAGTATCAGTTGACACCCCTGAAATCTCTCAGTGCTGCGCTAGTTCCACCAACACACCTATGGATAAGGTTTTGGACGTAGAAGAACTGACGAGTTCGATTAGAGACCTCAAGCAGCCCAGGACCCAAAACTCAGCCAAGGAATGGAGTGGACGACGTTCAAGCATTGTCTGTCTCAAATGCAACCGAAATGGACACATTGCCAGAAACTGCCAGAAACTGGGCGAAGGACAACCACCTGTCAGGGGAGGCCCACCACAAGTCGCCAAACTAACTCCCCCTGTCACAAGGAGCCAAGTGACAGGAGGGGACGACTATGGCTCGAACATGGTTATGTCAACTGTGTACGAAAAAGCAGTTGGAGAGTGCCCACTGGCCACAGTACGATTGGGTGGAACAGACGTACCTTGCCTTTTAGACTCAGGATCAGAAGTATCCACAATTACACAAGAATTTTTCGATGAACATTTTCGCCTCCAAGGGAAAACTCTTTTACCTACTGGTGATTGGTTGAGATTAACTGCAGCGAATGGATTAGAAATACCATACGTTGGATACCTAGAACTGGACGTTGAAGCCTTGGGAGTCATGATCCCACGAAGAGGAATTTTAGTTGTAAAGAGTCCAGCGAGTCAAGAGGCCAGGCAACGCAAGAAGAAAAACCCAGGGTTAATAGGAATGAACATTGTTACCCAACTGCACGAACCTTTCAAGAATGGAAAAGCAGAAACTTCCTCTGGATGGAGCAAAGTATTGAGGATAACATCTAATACCCAGTCCATCTCGGTCCGTGGTTTTGCAAAAGTAGCTGGCAAATCTCAGATTAGAGTCCCAGCTGGATCAGTTTCAGGACCCCAGACCAGAAACACAGCTGCCCTAGCGGAGCCATTAAGTGGACGAGTGCCAGGAAACCTTGTTGTCATCAACACTCTCACTCATGTAAATAATGGACAACTTCATGTAAGAGTCGCAAATATTACTGGCGAAGATGCTTGGCTTCAGCCCCACATGCGGATAGGAGTACTTCATGAGATTAGAGATGTCGAGGATACTAAAAACAACATCAACTTCGAAAGAGTTTCAGTCAATGAAGAGATGGTGTTTGTTAGAGAATCCATGACAAAAGAGAAGCAAGAACAGTCATCCGTGTGCTCAATTGACCTGTCAGATGTAGAATGCACCCCTGAACAAAAAAAGAAGCTTGAGAACCTGTTTCAGAAGCATGCAAGTGTCTTCACAAAGGATGAAAATGACCTTGGATACACAGAGACAGTCAAACACAAGATTCCGACCATAGATCAAGTACCAGTTGCACAGCCTTATCGGAGATTCCCACCTAACCAGTTTCAAGAGGCAAAAGATCACATATTAAAGCTTCTGGACAGTGGAATTATCCAAGAAAGTCACAGCCCTTATGCTGCACCTACCGGTATTGTACTAATAAGAAAAAAGGATGGTTCCTTGAGGCTATGCGTCAATTACTGA

Transcript

ANN12659-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14893	PNMA	PNMA	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026523	Family	Paraneoplastic antigen Ma	Interproscan
IPR048270	Domain	Paraneoplastic antigen Ma-like, C-terminal domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23095	PARANEOPLASTIC ANTIGEN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan