Detailed information of ANN12870-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:6974023...6982822
NR annotation: KAJ7382862.1, Rho GTPase-activating protein 21 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DFG0Rho GTPase-activating protein 21-A OS=Xenopus laevis OX=8355 GN=arhgap21-a PE=2 SV=1
Q71M21Rho GTPase-activating protein 21-B OS=Xenopus laevis OX=8355 GN=arhgap21-b PE=2 SV=1
A2RUV4Rho GTPase-activating protein 21 OS=Xenopus tropicalis OX=8364 GN=arhgap21 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002824 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17820
all species →
PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →
DomainPDZ domainInterproscan
IPR036034
all species →
Homologous_superfamilyPDZ superfamilyInterproscan
IPR041489
all species →
DomainPDZ domain 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23175
all species →
PDZ DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN12870-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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