Gene detail

Detailed information of ANN12913-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:7327301...7332923
NR annotation: CAH3177556.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N5L8	Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1
Q99JH1	Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1
Q2KIR4	Ribonuclease P protein subunit p25-like protein OS=Bos taurus OX=9913 GN=RPP25L PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008516 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01918 all species →	Alba	Alba	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002775 all species →	Domain	DNA/RNA-binding protein Alba-like	Interproscan
IPR051958 all species →	Family	Alba-like nucleic acid-binding	Interproscan
IPR036882 all species →	Homologous_superfamily	Alba-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13516 all species →	RIBONUCLEASE P SUBUNIT P25	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000172 all species →	Cellular Component	ribonuclease MRP complex	Interproscan
GO:0001682 all species →	Biological Process	tRNA 5'-leader removal	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14525	RPP25; ribonucleases P/MRP protein subunit RPP25	EC:3.1.26.5	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.