Gene detail

Detailed information of ANN12977-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:8492849...8508794
NR annotation: CAH3021900.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5BLE8	All-trans-retinol 13,14-reductase OS=Danio rerio OX=7955 GN=retsat PE=1 SV=1
Q64FW2	All-trans-retinol 13,14-reductase OS=Mus musculus OX=10090 GN=Retsat PE=1 SV=3
Q64FG0	All-trans-retinol 13,14-reductase OS=Macaca fascicularis OX=9541 GN=RETSAT PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005663 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01593 all species →	Amino_oxidase	Flavin containing amine oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002937 all species →	Domain	Amine oxidase	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR052206 all species →	Family	All-trans-retinol saturase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46091 all species →	BLR7054 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09516	RETSAT; all-trans-retinol 13,14-reductase	EC:1.3.99.23	Retinol metabolism	ko00830	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.