Detailed information of ANN12978-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:8510734...8516819
NR annotation: CAH3021901.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P54680Fimbrin OS=Dictyostelium discoideum OX=44689 GN=fimA PE=2 SV=2
Q63598Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2
A7E3Q8Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001622 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001589
all species →		Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR039959
all species →		FamilyFimbrin/PlastinInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961
all species →		FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005884
all species →		Cellular Componentactin filamentInterproscan
GO:0032432
all species →		Cellular Componentactin filament bundleInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan
GO:0051639
all species →		Biological Processactin filament network formationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN12978-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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