Detailed information of ANN13032-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:10043275...10068795
NR annotation: XP_044178691.1, ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like isoform X1 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8LQJ9ATP-dependent zinc metalloprotease FTSH 4, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH4 PE=3 SV=1
Q8LQJ8ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH5 PE=3 SV=1
O80983ATP-dependent zinc metalloprotease FTSH 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FTSH4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000074 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21232
all species →		Yme1-like_NYme1-like, N-terminalDomainInterproscan
PF00004
all species →		AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048438
all species →		DomainYme1-like, N-terminal domainInterproscan
IPR001584
all species →		DomainIntegrase, catalytic coreInterproscan
IPR003959
all species →		DomainATPase, AAA-type, coreInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23076
all species →		METALLOPROTEASE M41 FTSHInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0004176
all species →		Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0005743
all species →		Cellular Componentmitochondrial inner membraneInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0006515
all species →		Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0007005
all species →		Biological Processmitochondrion organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13032-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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