Detailed information of ANN13056-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:10520866...10528238
NR annotation: XP_044179715.1, integrin alpha-8-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P53711Integrin alpha-IIb (Fragment) OS=Papio cynocephalus OX=9556 GN=ITGA2B PE=2 SV=1
P08514Integrin alpha-IIb OS=Homo sapiens OX=9606 GN=ITGA2B PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000604 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20806
all species →
Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018184
all species →
Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR048286
all species →
DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR032695
all species →
Homologous_superfamilyIntegrin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220
all species →
INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005178
all species →
Molecular Functionintegrin bindingInterproscan
GO:0007160
all species →
Biological Processcell-matrix adhesionInterproscan
GO:0007229
all species →
Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305
all species →
Cellular Componentintegrin complexInterproscan
GO:0009897
all species →
Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627
all species →
Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13056-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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