Gene detail

Detailed information of ANN13097-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:11622875...11630412
NR annotation: XP_015766133.1, PREDICTED: homeobox protein CDX-2-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q61670	H2.0-like homeobox protein OS=Mus musculus OX=10090 GN=Hlx PE=2 SV=1
A0JPN1	H2.0-like homeobox protein OS=Rattus norvegicus OX=10116 GN=Hlx PE=2 SV=1
A7MB54	H2.0-like homeobox protein OS=Bos taurus OX=9913 GN=HLX PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR052497	Family	H2.0 Homeobox Transcription Factors	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46808	H2.0-LIKE HOMEOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan