Detailed information of ANN13133-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:12238820...12247647
NR annotation: XP_044171343.1, uncharacterized protein LOC122955657 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q92506(3R)-3-hydroxyacyl-CoA dehydrogenase OS=Homo sapiens OX=9606 GN=HSD17B8 PE=1 SV=2
Q5TJF5(3R)-3-hydroxyacyl-CoA dehydrogenase OS=Canis lupus familiaris OX=9615 GN=HSD17B8 PE=3 SV=1
Q6MGB5(3R)-3-hydroxyacyl-CoA dehydrogenase OS=Rattus norvegicus OX=10116 GN=Hsd17b8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000184 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →
adh_shortshort chain dehydrogenaseDomainInterproscan
PF13561
all species →
adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036291
all species →
Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR002347
all species →
FamilyShort-chain dehydrogenase/reductase SDRInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42760
all species →
SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016616
all species →
Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13133-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP