Detailed information of ANN13478-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:18563742...18576765
NR annotation: XP_015774360.1, PREDICTED: gamma-butyrobetaine dioxygenase-like isoform X3 [Acropora digitifera]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q924Y0Gamma-butyrobetaine dioxygenase OS=Mus musculus OX=10090 GN=Bbox1 PE=1 SV=1
O75936Gamma-butyrobetaine dioxygenase OS=Homo sapiens OX=9606 GN=BBOX1 PE=1 SV=1
Q5R5D8Gamma-butyrobetaine dioxygenase OS=Pongo abelii OX=9601 GN=BBOX1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005841 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02668
all species →		TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042098
all species →		Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR003819
all species →		DomainTauD/TfdA-like domainInterproscan
IPR050411
all species →		FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →		GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →		Biological Processcarnitine biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13478-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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