Detailed information of ANN13492-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:19125148...19140795
NR annotation: XP_020615907.1, CLIP-associating protein 1-like isoform X1 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1A5G0CLIP-associating protein 1 OS=Xenopus tropicalis OX=8364 GN=clasp1 PE=1 SV=1
Q4U0G1CLIP-associating protein 1-A OS=Xenopus laevis OX=8355 GN=clasp1-a PE=2 SV=2
Q7Z460CLIP-associating protein 1 OS=Homo sapiens OX=9606 GN=CLASP1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001513 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21041
all species →
XMAP215_CLASP_TOGXMAP215/Dis1/CLASP, TOG domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR021133
all species →
RepeatHEAT, type 2Interproscan
IPR045110
all species →
FamilyXMAP215Interproscan
IPR034085
all species →
DomainTOG domainInterproscan
IPR048491
all species →
DomainXMAP215/Dis1/CLASP, TOG domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12609
all species →
MICROTUBULE ASSOCIATED PROTEIN XMAP215Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000776
all species →
Cellular ComponentkinetochoreInterproscan
GO:0000922
all species →
Cellular Componentspindle poleInterproscan
GO:0005813
all species →
Cellular ComponentcentrosomeInterproscan
GO:0007051
all species →
Biological Processspindle organizationInterproscan
GO:0007052
all species →
Biological Processmitotic spindle organizationInterproscan
GO:0008017
all species →
Molecular Functionmicrotubule bindingInterproscan
GO:0030951
all species →
Biological Processestablishment or maintenance of microtubule cytoskeleton polarityInterproscan
GO:0035371
all species →
Cellular Componentmicrotubule plus-endInterproscan
GO:0046785
all species →
Biological Processmicrotubule polymerizationInterproscan
GO:0051010
all species →
Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0051298
all species →
Biological Processcentrosome duplicationInterproscan
GO:0061863
all species →
Molecular Functionmicrotubule plus end polymeraseInterproscan
GO:0015631
all species →
Molecular Functiontubulin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13492-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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