Detailed information of ANN13566-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:21024699...21031211
NR annotation: CAH3169479.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8N0X2Sperm-associated antigen 16 protein OS=Homo sapiens OX=9606 GN=SPAG16 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005097 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR050995
all species →		FamilyWD repeat and F-box domain-containing proteinInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472
all species →		RepeatG-protein beta WD-40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14604
all species →		WD40 REPEAT PF20Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0035082
all species →		Biological Processaxoneme assemblyInterproscan
GO:1990716
all species →		Cellular Componentaxonemal central apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13566-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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