Detailed information of ANN13799-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:25588538...25598953
NR annotation: CAH3129393.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002840 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19030
all species →		TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR048287
all species →		DomainThrombospondin-like, N-terminal domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050969
all species →		FamilyDevelopmental Signaling ModulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14949
all species →		EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005102
all species →		Molecular Functionsignaling receptor bindingInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0048856
all species →		Biological Processanatomical structure developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13799-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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