Detailed information of ANN13839-RA in Leptoseris scabra

Genomic Location: Scaffold_7__1_contigs__length_55811456:26415736...26417569
NR annotation: CAH3185470.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VCF9Protein LSM12 OS=Bos taurus OX=9913 GN=LSM12 PE=2 SV=2
Q3MHD2Protein LSM12 OS=Homo sapiens OX=9606 GN=LSM12 PE=1 SV=2
Q9D0R8Protein LSM12 OS=Mus musculus OX=10090 GN=Lsm12 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008416 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09793
all species →
ADAnticodon-binding domainDomainInterproscan
PF21166
all species →
LSM12_LSMLSM12, LSM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019181
all species →
DomainLSM12, anticodon-binding domainInterproscan
IPR048478
all species →
DomainLSM12, LSM domainInterproscan
IPR047574
all species →
DomainAD domainInterproscan
IPR039683
all species →
FamilyProtein Lsm12-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13542
all species →
LSM12 HOMOLOGInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for ANN13839-RA in Leptoseris scabra.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN13839-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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