Detailed information of ANN13859-RA in Montipora grisea

Genomic Location: Scaffold_1__1_contigs__length_50156999:17295430...17339700
NR annotation: XP_029199743.2, cadherin-23-like isoform X2 [Acropora millepora]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q24292Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000235 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan
PF00017
all species →
SH2SH2 domainDomainInterproscan
PF01085
all species →
HH_signalHedgehog amino-terminal signalling domainDomainInterproscan
PF00092
all species →
VWAvon Willebrand factor type A domainDomainInterproscan
PF00028
all species →
CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR009045
all species →
Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR000980
all species →
DomainSH2 domainInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036860
all species →
Homologous_superfamilySH2 domain superfamilyInterproscan
IPR000320
all species →
DomainHedgehog, N-terminal signalling domainInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR001657
all species →
FamilyHedgehog proteinInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR039808
all species →
FamilyCadherinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027
all species →
CADHERIN-23Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0007267
all species →
Biological Processcell-cell signalingInterproscan
GO:0007275
all species →
Biological Processmulticellular organism developmentInterproscan
GO:0016342
all species →
Cellular Componentcatenin complexInterproscan
GO:0045296
all species →
Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0098742
all species →
Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16669FAT4; protocadherin Fat 4-Cell adhesion moleculesko04515deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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