Gene detail

Detailed information of ANN13943-RA in Montipora grisea

Genomic Location: Scaffold_1__1_contigs__length_50156999:20657030...20659888
NR annotation: KAJ7379490.1, hypothetical protein OS493_015274 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN13943-RA

ATGGCAAGTGCTCCTGCTCGGCAGCTCAACAGTAAGGGAATTCGTAGTGCCCTACTTAGCAAGGTCTTACCGGCTGTGCAAGGAACTTGTTCGCTACTATCAGCTAAAATATCGTACAACAAAAATGAGGGAATATCTTTCAAAGATCAATGGCGAAACATTTGTCAGAAGCGTGACGAATGCGATGAAAGGATTAAGAAAATGAAAGGAGTGGCATTTTTCTTCTCCTCTATCGCCACACTAGAGAGACGAACTAAAGAGAAGAGCGAAAAGGCAAACAAGGAAAAAGAAGACGAGGAATACGACGAACAGAACGATGAGGTACAAGAAAAGCATTGGCCAGCAATGAATTACTGGATTGCAGTGCAGTCTTCAAACGGCATGCGCGTATCAACGGTACCTTTGCATTCGACATTATTACAGACAGACATGGAAGTGACAGCTAAGGCACTGCCAGTGTGCAAACGTGGGGAAGAAGAGCAATCGTGTGCACCATTGTGCACAACACTAAAAGACCATAACAACAACTTTATGCAGTCCAAAGTTGACATGTCTTTTTCCAACAGTCTTGAATTGTTGCAAGATCAACTGCTAGAGGAGCCCTTGGAATCAATTCACGCAAGTGAGCGTGTCGTAAGGTTACAAGTTGTTTCCAGGTCCTTTATTGCCAAGCTTCGTGACAAACTGATACCATCTCTAGTGAGTGCCGGCTTGCAATTTGACGTTTTTGGAATAGAAGAATGCAATGTATCTTCAGACGTCCAAAACGCCACAAAAGCCCTCGCGTCGCCGATCGTAGTAGCGGTCAATGACATCGAACGAGCCATGGCGAAACTTGGTTATGCACTCTACTGTGGCGAAATGTTTAGAAAGGTGAAGACTGCAAGATATACATATCAGCACTGCTGTTCGGTAAAGAAATTTCTTTCTTTGCTGGGCAGCAATGATCAGTTCAAAGAAACAATCATCAAGCATCTCAACAAGTTAGTGGAAATTCTTGGTGATAGAGAAAGCGATTTTATCAAGCAGATGCGTATCAACTACGACTTGATCGAAGTGAATGGAGGATGGTGCTTTTCAATTAGCCAGAGAAAGTTTGTGTCAAACCCCATCAAAGAATCTGATATTGGCAAAGAATCTCCGAGGGCGTTCATCGAGTACGAACACACTAAAGAGCCAGATCCAGGATACTTTAAAGAAATATTAGAAAATAGCCTCAGTCAGCTGGAAATAGCGCACTTTTGCGAATATTTCATTCGTCTGTTCAACTGCCGCATCAAACAACACAAAGAAAAAGTCATGTGCCTCATAGGAGAGCCCAACAGTGGAAAAACGAGTCTTTTCACGCCCATCAGTCGCTTGATCCCTGCCAGATACATCGCTATGATCAGCAAACAAAAGGCCTTCAACAAGAGCTTGATCGATGAAAATACTCAAATACTTTTCCTGGACGAGGCTCACGCCAAGCTGATGGATCCAGACGACTGGAAAATATTAACACAAGGAGGGCTAACGGCACACGACCGCAAGTACAAAACATCAAGCATGGCAGTCATAAGATGTCCAATGTTCATCACCTGTCAGACGGACATGGACTTTGGTGCAGAGCACAACACCGCTATGGATGCCCGCTTAAAAAAGTTCTACTTCAGAAGTCTGACCTCGCCGCGTGTGGCAGGAGTACAAGAATTCTTGCGAGCCAATGCTATGGATTGCATCGTTTGGGCATGCAGTCTCGCCCAGACTCCAGACGACGAATTACCCCCTCCCGTGCCAGGGACCAGTCTAAGAACGGATGAGAACATCGACGAAGACGAAAAAGACAGGATAAGGGCCATACAACTAGACGAAAGCGATAGCGAGCAGGAAGGCAGTGAACAAGTGGAACCCACCACGGCCATAGAAGACAGTGATGGACAGTGCGAAGACTCGGACGCTGTCTCTACGTATATGGGCCAGTGGGGAAAGAGTCTAGAGAAAATCGAACGTTTGAAAGAAAAACAGCCAGGTCACAGTCTCGCGCAGAGGCAACTTGGTCTGCTCGCCGCTGAAATCAAGCGTGTTGTCGATGAAAGGAAGAGCCAGAAAGAGCGCGCACGATTGCGTGTGTTGGAAGAAACTAAGGAGCGCTGGATCGCGCTTGGAATGATGAGAGAGGAAGACGCCCACCTACTAGATTCTGTCACCGGCCCTTACCATCCAAATATAGAGCGTTCCAGAGATGAATACATCTCCAGAAAGAAAGAAGAAGAGCAACGATTGCTCGAACGAAAAGCACGCGAGTACTTCGACAACGAGTGGGTGATGGAAAAGGAAAAAGAACTCCAAGAGCTCCAAAGAAATGAAGATGCAGCCACAGACCCAGACATAAAGAAAGCAATCCATTACATGATGGAAATAACTGTCGAAGCTCTGAAGTTGAGATTTCAGAGGGAAGAAGTTCCCGGGCTTGCAAAGCTTGTACTTCTGGAAAGGAGGAAAAAGGCCATGGATATGCAGTGGGTCTCTCCAGCACAAGCACAGCGAGTCAACAGCATCTGGTGTCCCCTTCCGTATCCTTGCGAGGAAATGGAGGATGACGATGAGCAGGACCTCTTCATAACGCCCTCCACTGCGCTCAAAGCGCATGGCCAATCATCCACCCCAAAACGGAAGTCTCAGAAAAGACAGAGTCAGCAATCTAGAACCCCAGTTCCAAAAAGAGGAAGAATTACCCACTTTTTCAGCCCGAGTCAAGATTAA

Transcript

ANN13943-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00519	PPV_E1_C	Papillomavirus helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001177	Domain	DNA helicase E1, C-terminal, Papillomavirus	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08740	MSH4; DNA mismatch repair protein MSH4	-	Chromosome and associated proteins	ko03036	deepkoala