Gene detail

Detailed information of ANN14363-RA in Nanomia septata

Genomic Location: chr3:30948532...30956490
NR annotation: KAJ8022200.1, hypothetical protein HOLleu_39614 [Holothuria leucospilota]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P17139	Collagen alpha-1(IV) chain OS=Caenorhabditis elegans OX=6239 GN=emb-9 PE=1 SV=5

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01413	C4	C-terminal tandem repeated domain in type 4 procollagen	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001442	Domain	Collagen IV, non-collagenous	Interproscan
IPR036954	Homologous_superfamily	Collagen IV, non-collagenous domain superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan
GO:0005581	Cellular Component	collagen trimer	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan