Detailed information of ANN14617-RA in Nanomia septata

Genomic Location: chr3:46556881...46563707
NR annotation: XP_047142430.1, vacuolar protein sorting-associated protein 53 homolog [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZLD7Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus OX=9031 GN=VPS53 PE=2 SV=1
Q5R5J4Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii OX=9601 GN=VPS53 PE=2 SV=2
Q8CCB4Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04100Vps53_NVps53, N-terminal RepeatInterproscan
PF16854VPS53_CVacuolar protein sorting-associated protein 53 C-terminusRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR007234DomainVps53, N-terminalInterproscan
IPR039766FamilyVacuolar protein sorting-associated protein 53Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR038260Homologous_superfamilyVps53, C-terminal domain superfamilyInterproscan
IPR031745DomainVps53, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12820VACUOLAR SORTING PROTEIN 53Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

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