Detailed information of ANN15447-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:4683646...4686474
NR annotation: XP_020627860.1, uncharacterized protein LOC110065103 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6RI86Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Trpa1 PE=1 SV=2
Q8BLA8Transient receptor potential cation channel subfamily A member 1 OS=Mus musculus OX=10090 GN=Trpa1 PE=1 SV=1
Q8VHS6Ankyrin repeat and SOCS box protein 15 OS=Mus musculus OX=10090 GN=Asb15 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010036 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF03281
all species →
Mab-21Mab-21 protein nucleotidyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR046903
all species →
DomainMab-21-like, nucleotidyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24198
all species →
ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN15447-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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