Gene detail

Detailed information of ANN15563-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:7883515...7905062
NR annotation: CAH3181767.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN15563-RA

ATGAGGGATAAGACACGGGCCTTGGAGGTACAAAGTGCGAAGGCGGGCCTGAAGATCAATGCCACCAAGACAAAGCTGATGCGTATTGGTACCAAACGTGACGATGGTGTGTCGGTCGCTGGGGAGCGGGTTGAAGAAGTGGACGAGTTCACATACCTTGGGAGCATTGTAAGCAATAAGGGAGGCACTGATGAGGACATTCAGGCACGAATTGGAAAGGCAAGGCAGGCATTTGCGATGCTGAGACCAATATGGCGATCCACGGCACTAACAACCAAGACCAAGCTGAGAGTCTTTGGGTCAACTGTAAAGGCGGTGCTTTTGTATGGTTCTGAAACTTGGAGGCTGACCAAGGGACTGGAGCAGAAGCTCTGGGCCAAAAACAGTCAACAACTAGCCATTAGTCTTCTTTTCAATCAACAAAACTACAACTGTTACACCTACAGTGTACAATTTAACACTGGATGTTGTTCAATCTATGATTTAGAAAATCCCTACACATACCACTGGCAGCAGATCTCAGCTCCTGAAGGTAGTCATGGTTACATGGAAGGACAGGACTCTAGAAGAGTTATACTCAGTCAGCTTGACCAGACAGGTGTGTACCAGTTCAAAGTGAAGGTCATAGGATCAGACCAAGCTTATGGATATGCATTCATAAATGTCACTGTAGTTCCAGCTCCTCGAGTGAACAAGCCACCTCGTGCTGACATCTCCCCCAAAGAACAGACCATCACTCTTCCCACTAATGAAGTGGTCCTTGATGGATCAAAAGTGAAAGGACCTCTAAACAACAAGAACAAGATGATGAGTTCAGGAGTTGACTCTTCAGTACTACAGCTCAAGTCGCTTGTGCCTGGAATATACACTTTCAAGCTGACTGTCACTGACTCAGATGGTGAATCAGATTCAACCACGGCAACAGTGACTGTCAATGATGAGAAGGATTACTCTCCTGTGGCACGTGCTGGGAATGACGTAGTGATTGTACTTCCTGTGGACCATGTGACACTGTATGGTAATGGCAGTACTGATGACAAGGGCATTGTTGGCTATGAATGGAGCAAGACTCCTTCCAGTCCGGCTGTAGGCGACATGCAGGGTACAAGCTCTCCAACCCTCAAAGTGTCTAACATGGTTGTGGGTGACTACACATTTGTGCTGAAAGTCACTGACACAGGTGGACAGACGGCCAGCTCCAGTGTGACTGTGGTAGTCCAACCCGAGAAGAATGCGCCTCCTGTGGCAGTAGCTGGTTCTGATAAGGACCTGGTGTTCCCTGATGACTCAACAGTTCTTGATGCCTCTGCCAGCCACGATGATCAAAAAATTGTCAAATACCACTGGGAGCAGTCGAGTGGTCCACACCAATCTGAGATGACTGGAGTTGATGACAAAGTTGTGACCGTCAAGAAACTTTTTGAGGGGAATTACGTGTTCAAGCTGACCGTGACTGATGACAAAGGGCTCACGGGAACTGATACGGTGGCAGTCAATGTTAAGAAGGACATAAACAAGCCACCCACAGCAAATGCCGGCCCAGATGTCGTTGTGTATCTGCCAAACAGAGCAGCAGAGTTGGACGGTTCCAGCTCATATGACGATCACGGCATTGTCGAGTATGAGTGGTCACGTGATCCCAAGAGTCTGGCCGCTGGGGATGTTATCAACAACAGTGACCATCAGGCCGTATTGCGACTGTCTAACCTCGTCGAAGGCATGTACAGATTTAAACTCACAGTGGCTGATGGGAAGGGACTCAAAGGAAGTGATGACGTAGTTTTGACTGTCAAGGAAGATGAAAACAGCGCACATCTTGTGGAGTTATACCTCGATGTAGACATCACTAAATTCACCGAAGAAAATAAGGAACAGTTGATTCGTAAGCTGGCAGTTATTCTTGATGTCCAGGATGAAGACATTATTGTCGAACATCTCAAAGAAGCTGGAGTAGGACACAGCCTCATGGTGATGTTTTACGTTAAAGACAAAGTTTCTAAAGCTAAAGATGGCTATGAAGTAGCTGGACTACTAAAGGAAAAGATTGGAAACGAAGAAGGCTTCTTTGAATTTGTAATGTTGAAAGTTGAACCCTACATTCATGCGATTCACGTGGTCTCGTTGTTGTCAGTTTGCAGGAACAACTGTTCAGGACATGGCTACTGTGATCGCAGCACCAAGATGTGTGTCTGTGAGAGCTTCTGGATGCAAGACTTTTTTAAAGCTCACTTTGGCACAAAAGAAAGCAACTGTGACTGGAGTATTCTCTATGTGACCGTGATAATCTTTGGTATCATCATGGCCATTGGCGGAATAGTTTGGGCAATATGTTTCTGCATGGGAAGGAGACGTGTTCGCGGGAAGAGACGTCACCATCGCTACGCTGTTCTTGATGAAGACGATGATGATAAGCTGGAAAGCATGGAGATGCTTCCTAAAGGAGGTAAATACCTAAGCACAAGTTTGATGATAAGCGACACGGACGATGACAGTGACGATGAATCCACAGTATTTGAAGTCAAGAAACGGAGCATGAACGGCTCAGTGAATGGCTATATTAGGAAAGACACGTGA

Transcript

ANN15563-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K135	Dyslexia-associated protein KIAA0319-like protein OS=Mus musculus OX=10090 GN=Kiaa0319l PE=1 SV=1
Q5RFR6	Dyslexia-associated protein KIAA0319-like protein OS=Pongo abelii OX=9601 GN=Kiaa0319l PE=2 SV=1
Q8IZA0	Dyslexia-associated protein KIAA0319-like protein OS=Homo sapiens OX=9606 GN=KIAA0319L PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003185 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18911 all species →	PKD_4	PKD domain	Domain	Interproscan
PF20049 all species →	DUF6451	Domain of unknown function (DUF6451)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR022409 all species →	Domain	PKD/Chitinase domain	Interproscan
IPR029865 all species →	Family	Dyslexia-associated protein KIAA0319-like	Interproscan
IPR045609 all species →	Domain	Domain of unknown function DUF6451	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46182 all species →	FI19480P1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001764 all species →	Biological Process	neuron migration	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24404	KIAA0319L; dyslexia-associated protein KIAA0319-like protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.