Detailed information of ANN15708-RA in Nanomia septata

Genomic Location: chr3:106626251...106659460
NR annotation: XP_047130660.1, nonsense-mediated mRNA decay factor SMG9 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H0W8Nonsense-mediated mRNA decay factor SMG9 OS=Homo sapiens OX=9606 GN=SMG9 PE=1 SV=1
Q5PQS6Nonsense-mediated mRNA decay factor SMG9 OS=Rattus norvegicus OX=10116 GN=Smg9 PE=1 SV=1
Q9DB90Nonsense-mediated mRNA decay factor SMG9 OS=Mus musculus OX=10090 GN=Smg9 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR039177FamilyNonsense-mediated mRNA decay factor SMG9Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14270UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18735SMG9; protein SMG9-Messenger RNA biogenesisko03019deepkoala

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