Genomic Location: Scaffold_10__2_contigs__length_57677642:11610204...11641588
NR annotation: XP_028415385.1, uncharacterized protein LOC114538404 [Dendronephthya gigantea]
Species Leptoseris scabra · all data for this species · gene families
| CDS |
| ANN15747-RA |
| Transcript |
| ANN15747-RA |
| Protein |
| ANN15747-RA |
| UniProt accession | Description |
|---|---|
| P35601 | Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2 |
| P35251 | Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4 |
| P35600 | Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000030 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03564 all species → | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF05585 all species → | DUF1758 | Putative peptidase (DUF1758) | Family | Interproscan |
| PF05380 all species → | Peptidase_A17 | Pao retrotransposon peptidase | Family | Interproscan |
| PF00533 all species → | BRCT | BRCA1 C Terminus (BRCT) domain | Family | Interproscan |
| PF00004 all species → | AAA | ATPase family associated with various cellular activities (AAA) | Domain | Interproscan |
| PF08519 all species → | RFC1 | Replication factor RFC1 C terminal domain | Domain | Interproscan |
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005312 all species → | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR047854 all species → | Domain | Replication factor C, lid domain | Interproscan |
| IPR043128 all species → | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR008737 all species → | Domain | Peptidase aspartic, putative | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001357 all species → | Domain | BRCT domain | Interproscan |
| IPR001969 all species → | Active_site | Aspartic peptidase, active site | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| IPR036420 all species → | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR008042 all species → | Family | Retrotransposon, Pao | Interproscan |
| IPR008921 all species → | Homologous_superfamily | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal | Interproscan |
| IPR021109 all species → | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR003959 all species → | Domain | ATPase, AAA-type, core | Interproscan |
| IPR013725 all species → | Domain | DNA replication factor RFC1, C-terminal | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22955 all species → | RETROTRANSPOSON | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004190 all species → | Molecular Function | aspartic-type endopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0006260 all species → | Biological Process | DNA replication | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0003689 all species → | Molecular Function | DNA clamp loader activity | Interproscan |
| GO:0005663 all species → | Cellular Component | DNA replication factor C complex | Interproscan |
ANN15747-RA.
