Detailed information of ANN15747-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:11610204...11641588
NR annotation: XP_028415385.1, uncharacterized protein LOC114538404 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35601Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2
P35251Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4
P35600Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF08519RFC1Replication factor RFC1 C terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR047854DomainReplication factor C, lid domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001357DomainBRCT domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR013725DomainDNA replication factor RFC1, C-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003689Molecular FunctionDNA clamp loader activityInterproscan
GO:0005663Cellular ComponentDNA replication factor C complexInterproscan

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