Gene detail

Detailed information of ANN15798-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:12826600...12827868
NR annotation: KAF6040487.1, hypothetical protein EB796_001200 [Bugula neritina]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4G2T3	Sphingolipid 10-desaturase OS=Thalassiosira pseudonana OX=35128 GN=desA PE=1 SV=2
Q43469	Delta(8)-fatty-acid desaturase OS=Helianthus annuus OX=4232 GN=sld1 PE=1 SV=1
Q9ZRP7	Delta(8)-fatty-acid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=SLD1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004190 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00173 all species →	Cyt-b5	Cytochrome b5-like Heme/Steroid binding domain	Domain	Interproscan
PF00487 all species →	FA_desaturase	Fatty acid desaturase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001199 all species →	Domain	Cytochrome b5-like heme/steroid binding domain	Interproscan
IPR012171 all species →	Family	Fatty acid desaturase	Interproscan
IPR018506 all species →	Binding_site	Cytochrome b5, heme-binding site	Interproscan
IPR036400 all species →	Homologous_superfamily	Cytochrome b5-like heme/steroid binding domain superfamily	Interproscan
IPR005804 all species →	Domain	Fatty acid desaturase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19353 all species →	FATTY ACID DESATURASE 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016717 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN15798-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.