Detailed information of ANN15993-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:17570718...17578200
NR annotation: XP_044181914.1, elongator complex protein 6-like isoform X2 [Acropora millepora]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0IHA2Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1
B2RYG8Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1
Q28CX0Elongator complex protein 6 OS=Xenopus tropicalis OX=8364 GN=elp6 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005698 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09807
all species →
ELP6Elongation complex protein 6FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018627
all species →
FamilyElongator complex protein 6Interproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16184
all species →
ELONGATOR COMPLEX PROTEIN 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002098
all species →
Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588
all species →
Cellular Componentelongator holoenzyme complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN15993-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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