Genomic Location: Scaffold_11__1_contigs__length_59981192:20362442...20371162
NR annotation: XP_029183653.1, piggyBac transposable element-derived protein 4-like isoform X3 [Acropora millepora]
| CDS | ||||
| ANN16295-RA | ||||
| Transcript |
| ANN16295-RA |
| Protein |
| ANN16295-RA |
| Uniprot term | Description |
|---|---|
| Q8LHH9 | Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1 |
| Q0DXS3 | Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2 |
| Q9LQV2 | RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05183 | RdRP | RNA dependent RNA polymerase | Family | Interproscan |
| PF13843 | DDE_Tnp_1_7 | Transposase IS4 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007855 | Family | RNA-dependent RNA polymerase, eukaryotic-type | Interproscan |
| IPR029526 | Domain | PiggyBac transposable element-derived protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23079 | RNA-DEPENDENT RNA POLYMERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003968 | Molecular Function | RNA-dependent RNA polymerase activity | Interproscan |
| GO:0030422 | Biological Process | siRNA processing | Interproscan |
| GO:0031380 | Cellular Component | nuclear RNA-directed RNA polymerase complex | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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