Detailed information of ANN16546-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:31312232...31345197
NR annotation: KAJ7369746.1, Protein zgrf1 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VGT45'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2
Q86YA35'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003029 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06839
all species →		zf-GRFGRF zinc fingerDomainInterproscan
PF10382
all species →		DUF2439Protein of unknown function (DUF2439)FamilyInterproscan
PF13086
all species →		AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010666
all species →		DomainZinc finger, GRF-typeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR052800
all species →		FamilyDNA Repair Helicase ZGRF1Interproscan
IPR018838
all species →		Domain5'-3' DNA helicase ZGRF1-like, N-terminal domainInterproscan
IPR041677
all species →		DomainDNA2/NAM7 helicase, helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28535
all species →		ZINC FINGER GRF-TYPE CONTAINING 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan
GO:0004386
all species →		Molecular Functionhelicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN16546-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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