Detailed information of ANN16571-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:31634917...31659853
NR annotation: CAH3181257.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96D4660S ribosomal export protein NMD3 OS=Homo sapiens OX=9606 GN=NMD3 PE=1 SV=1
Q6P2Z660S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1
Q5RC8260S ribosomal export protein NMD3 OS=Pongo abelii OX=9601 GN=NMD3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04981NMD3NMD3 family FamilyInterproscan
PF21192NMD3_OBNMD3 OB-fold domainDomainInterproscan
PF21193NMD_SH3NMD3 SH3 domainDomainInterproscan
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR039768FamilyRibosomal export protein Nmd3Interproscan
IPR007064DomainNmd3, N-terminalInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR048898Domain60S ribosomal export protein NMD3, OB-fold domainInterproscan
IPR048899Domain60S ribosomal export protein NMD3, SH3 domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000055Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan

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