Detailed information of ANN16784-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:34709908...34719944
NR annotation: XP_044181132.1, muscle M-line assembly protein unc-89-like isoform X2 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6R5N8Toll-like receptor 13 OS=Mus musculus OX=10090 GN=Tlr13 PE=1 SV=1
Q9Y2C9Toll-like receptor 6 OS=Homo sapiens OX=9606 GN=TLR6 PE=1 SV=2
Q9EPQ1Toll-like receptor 1 OS=Mus musculus OX=10090 GN=Tlr1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000113 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00047
all species →		igImmunoglobulin domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF07686
all species →		V-setImmunoglobulin V-set domainDomainInterproscan
PF13676
all species →		TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR013106
all species →		DomainImmunoglobulin V-set domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015621
all species →		FamilyInterleukin-1 receptor familyInterproscan
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11890
all species →		INTERLEUKIN-1 RECEPTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN16784-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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