Detailed information of ANN17085-RA in Montipora grisea

Genomic Location: Scaffold_11__1_contigs__length_59981192:50296139...50315800
NR annotation: XP_044181322.1, RCC1-like G exchanging factor-like protein isoform X1 [Acropora millepora]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CYF5RCC1-like G exchanging factor-like protein OS=Mus musculus OX=10090 GN=Rcc1l PE=1 SV=1
Q96I51RCC1-like G exchanging factor-like protein OS=Homo sapiens OX=9606 GN=RCC1L PE=1 SV=3
Q15751Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006857 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01335
all species →		DEDDeath effector domainDomainInterproscan
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF13540
all species →		RCC1_2Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001875
all species →		DomainDeath effector domainInterproscan
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR053035
all species →		FamilyMitochondrial GEF domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46337
all species →		RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0042981
all species →		Biological Processregulation of apoptotic processInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005743
all species →		Cellular Componentmitochondrial inner membraneInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0070131
all species →		Biological Processpositive regulation of mitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN17085-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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