Gene detail

Detailed information of ANN17115-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:42249351...42251288
NR annotation: CAH3146659.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5ZM55	Protein fem-1 homolog B OS=Gallus gallus OX=9031 GN=FEM1B PE=2 SV=1
Q6GPE5	Protein fem-1 homolog B OS=Xenopus laevis OX=8355 GN=fem1b PE=2 SV=1
P0C6P7	Protein fem-1 homolog B OS=Rattus norvegicus OX=10116 GN=Fem1b PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan