Detailed information of ANN17519-RA in Leptoseris scabra

Genomic Location: Scaffold_10__2_contigs__length_57677642:53310536...53332791
NR annotation: KAG5694275.1, hypothetical protein BaRGS_031993 [Batillaria attramentaria]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8V7S0CUB and peptidase domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
P98063Bone morphogenetic protein 1 OS=Mus musculus OX=10090 GN=Bmp1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000011 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20049
all species →
DUF6451Domain of unknown function (DUF6451)DomainInterproscan
PF00431
all species →
CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859
all species →
DomainCUB domainInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR035914
all species →
Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR045609
all species →
DomainDomain of unknown function DUF6451Interproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027
all species →
REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN17519-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN17519-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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