Gene detail

Detailed information of ANN17729-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:367915...371117
NR annotation: XP_020617292.1, neo-calmodulin-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P04464	Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
Q40302	Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
P05419	Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR051111	Family	Calcium-binding regulatory protein	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46311	CALCIUM-BINDING PROTEIN 8-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0032588	Cellular Component	trans-Golgi network membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02183	CALM; calmodulin	-	Exosome	ko04147	deepkoala