Gene detail

Detailed information of ANN17804-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:1703873...1715266
NR annotation: CAH3136771.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN17804-RA

ATGGAAATGTTTTACACATCACTTAAACCAATCTTGTTCCATGATGATGACAGGAACAATCAAAATTCAGATTTTGAACTATCACATTCGCTGGAATCTATAATTAACCAGTTGGAAGACAATGAGCCATCTCGTGTTGTTATTTACGGTGAACCTGGCTGTGGAAGGACAACACTTCTGCACAAGATCTGTAATAAACTCCTTGAAAGCAGGCTTGCAAACAATGAAATATTTGGTTTGAGAGTGAGAGCAGGATGCTCTGTGCAGTCTCTGTGGAATTTTCTGAGTGAGATTTCAAAGGAAAGGCAAGACAAAGATACTGCTTCATTACTTTTGCAATCAAGTGCCAAATTAAGCAAGAAATACAGGGCAGGGCAAGCCTTCATTTCATCTAATTTCAAACTAATCTGCATTGATGATGCTTATTCTGATGATGGAATGGTTTGGTCACACCTTTCACAGGTATTGCATGAAATAAAAGCCCATGTAATTGTTGTCTGTGCAAGAAACGAAGTTCCTCTCCTTCAAGCCACACTGACAGAGCCAACAGTTTTATCTGTGGAATTGAAAGGAATTTGCATGGATTCCTTCAAGAAATGCCTTCATCAGAAACTTCCCGAGTGGAAATTAAGTGATGAAGAACAATTGAGGATTTTCAAAACATTGAATGGCAACCCAACATCTCTGAAGATCATTGTCAATGCTGTTGATGAATTTAAACTTCCACCAGAAATTCTTGACTGCAGTTGCCTGTTGTGCTCCAAACATCGTAATGAACAAGAATGTTGCAGTGTTCGTAAGGTGATTCAGTTTTTGCTGGAGCACTTGACAGCCTTTGAGAAGGAAGTATTCAGTCAACTCTGTCAGTTACGAGAAGCCCTGCCCATGACGACTGTAATGGAGGAGATAGAGAAGCTTGTGAGACTTGGCTTGGTGAATAAAGAAGTCTTTGACACTGGAACAGATGAGGTCATCTATTCAATTTCAGTAGCTTCTTGCATTCAGTTGAGCTCACTGCAACTCACCTGTGCCTCTGATATTAATGGCGACTGCTCAGAAGGTATGGCGCATTTCAGTGTCTTTGATGAATGGTATGCTCTTCTCTCTGAAAAACTTCATCAACTCATAAGTGATGCTCAGGGAAATGCTTGGCCATTTGTCCCGGAAAAGTGCAAACTTGATTACTACAATATTGTGAATAATACAAACAATTATGCGACTGAGACCATTCCTGATTTTGCTGACATGAGCAAAAACTGGTTACATACAAATGCTGGAGAGATCATGGCCTTCCTTGGTGTTGTTTTTTTCATGGGAATTGTAAAGCTACCCAAAATTTCCATGTTCTTCTGCATCGACCCAAGAATTTACCAGGTTGCAGTGGTGTTCTCCAGAAACCAGTTCTTTCAACTTCTGAAATATTTGCATGTGTCTGCTCCAACTGAACTACCAGCCAGAGATCGTCCTGACTGCAAACTTTTCAAAATAACGCCTGCAATTGACACTCTGAGACGAACATTTCAACAAATATACAACCTGCACTGTGAACAGTCTATATTGATGGTGAAAGATAAGGACAATGGATACCTCAGCCAATTTGAAATTTACACAGAGAAAGACAATGCGCATGAAAATCAAACTTCACCTGTGGAAGGTCAGATGCAAATACCACAGGGTTTAGCTTGGCATGTTGTTACAAATCTGACTCGTTCTCTGGAGGTGAAGAATTATTTTGTTTTCATGGATAACTATTTCACAGTCCAAACCAATTTTGTAACCTGGTCAAATGAAAACAAAAACATGGCGGGCATAGTCGGGACTATATATGAAACAACAACAATAAACAAAACCAGAGGGCAGTACATTTCAAATGTTGGAGCTGAAGAGAGGTACAACATAAAAGAGCTGATTACATCTAAGAACTCTGTTGTACCATATTTGACTGAACAAGACATCTTAGAGGAGTGTTTGTTTCAAGCCGTTAAGGAAAAGATGTATGGAACTGTGGCAGCACTAGTGTTTGTTACGGACAGGTTCACTTATTGGCAAGGAAGTTCCCACACAACTCTACAGCTTGTTGAATACTTAAAGACGCATAGTCCTGGCACACCAATTGCACCTCAGTTGCTCATAAGAAAAGTCAGAGTCATGAAAAATGCTGGAGACCTACACGGTGCTGTGGATGCTCTTGATGACCTTCTTGTGAAAAAGAACCAAGTTGGTGAATGGGTTTACAAAGAAGAGCATGACCATCAACTGGTTAGTGCAGTTTGCATTCAAATCAAAGGCGATATTCAATTCAACCTTGGACAGTGGTTACAAGGATCAAAGCTTTTACTTGAATCACTGATTTTATTCAGCACCCTTCCCATTCCTGATACAAAGGGTATCTCCTCTAGCCTGGCTATTCTAGCCAATTGCCTTGAACAAATGAGTGTTGCTGAGTATGTTCCTCTGGCTCAGATGTATGGCCTCTCTGCCTCTCATCCTCTTCTGCAAGCCTACTACTGCTCATATGAGGCTTCCATGAGATCAAAGTACACGCCATTGTTTTATGCTAGACACAAGTGTCGTGCAGCAGAATTCATGTTGCATTACGCACAGCTGATTCCTGATGAAACTCAAAGACAGGAACACTTAAGAACTGCCATTGAAGATTTCAAGGACAGCATTCAAGCTCACAAGGAGTTGCAGTCCCTCACAAGCCGAGAGGAGTTCTATGTGTTTGCTTGTGCAGTGTACAAACTAGCCATTGCTTGTCAGGCAATGTCAACACAGCATAGCATTCAACAAGCACAGCACATCGGTAATATATCAACATTGTTGTATGAGCACTACTGTTCATTTCCTGGAATGATCCTTTTAGATGAAGAGATCACCAAATTGATCACTCATTGTCTTAGCTTTTTACAATTGAACTCATTTTGTGATGAGGAGCTTTCTCGCACAGAAGGGTCGGTAGAGGCCGTTGGTGACAGGGGACAGGGTGCTGCGGAGGAGCTTTCTCACACAGAAGGGTCGGTAGAGGACATTGGTGACAGGGGTCAAGGTGCTGCGGAGGAGCTTTCTCACACAGAAAGGTTGGTAGAGGACATTGGTGACCAGGGACAAGTTACTGCGGTATCAAGTGGCACCAAAGGAGAAGTGGATGTCAAGGTACCTAACTCATCTTCTTGGCAAATGCCCAATGCACACTGCCCAGGGGTTCAAGTAAATATTGATACAACAAACAAAGAATTCACTTTTGCAAATCATGAGGCCGTTTTGAAAGTACGCCATGAGGAACATTCAGTCACAGACAAGTTGAAGGAAACGTGGGAACACTTGACCATGAAATCAGACTGCAGTGACGTTCTATCTGCAGTGATTAGTAGCGTCCCTGTTTACTCAGGGAAGAATGCTAATGACAGTGACTTGACTGTTGATCGGGACAGCAACACCAGGGACAGCAGATCTTCTGTTACCATGGAAACTGTAGATCGCAGTGTTGTCACTCAGGATTTGGAACAAGAGACCATACCTTTGCCATATGGTAGATTCGTTCCGCCCCAAACTGACACCATTGAAACTCGACTCCAAGGGAAGCTGAAGTTGGATTCAAGTCAAAGAGTGCAAGCTGTTCTGGAGAAGGCAGGCTCGCTCAGCATGCATCTCATGCTCTGTCAGCGTCGACTACGGTGGCTAGGACATGTGCACCGTACGGAGGACGGTTGCATCCCAAACGACCTCTTGTATGGTCAGCTATCCTTGGGATGCCGCCCTGTAGGCTGCCCAGCTCTCCGCTATAAGGATGCCTGTAAGCGGGACCTGAAACTGACGGACACCAACCCAGACAGCTGGGAAAAGCTCACAGATGACAGAGATGGCTGGTGTCTTGCCGTACATGATGGTGTCAGGAGTGGAGAGGAGAAGAGGAACCTCCAGCTGGAGAACAAACGGACACAACGTGCCATTGTGTGGAGGTACGATTTTCCGTGCAATGAATGGAGGGGTGAGAAGACTTTGGCCTATGTCGGAGATTTACTGGAATTGGACAAAGGCAAAGAGGGAGCTCAGAGGAATGCCTTTATGGTTGAGTTCATCAACCAAGAAGATCCCTTTGCAAAATATGTGGCAAAGTGTTACAAGAAGGCTAACCTGTTGCTGAAAGAGCAACAGTATCAACAAGATGTTGTATGCCAGATGACAGCTCGTTACTATGCAACACTTTTCAACCAACAGCTGTACCAAGCAGGTCTAAATATGGGCCACATCGAGTTCCTTCCCGTAGTTTTGCTTAGGCTGGTTAATGAGAATGGTTCTTTAGCTGGTCTGTACAACGTTGAACGCTACATGTCCGGAGAGTTTGTGAAGCTAACCAACAACTTAAACTTTGTCAGAAAAAAGGGCACGGTGTCCGACCTTGTGCTTGCATTCAGCCATTTCACATACCAAGCATCCAATAAGCAGTTAATAATTGTTGATATTCAAGGCTGGACCCCTGCAGCTTCCAACCAGACTGGCTGTACGTTTCTCACTGATCCTCAGATTCATTCTGTTGTTTATAAGTGCTTTGGGACAGGAAATTTGCGTCAGGATGGTATCAACAGCTTCTGGAAAGAGATGCATCCACGATGCAATGACTTTTGTACAAAGTTACAGCTGGTTAGGCCAGATGTCAAAAAATCCCCATGA

Transcript

ANN17804-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54DK4	Alpha-protein kinase 1 OS=Dictyostelium discoideum OX=44689 GN=ak1 PE=3 SV=1
P90648	Myosin heavy chain kinase B OS=Dictyostelium discoideum OX=44689 GN=mhkB PE=1 SV=1
P42527	Myosin heavy chain kinase A OS=Dictyostelium discoideum OX=44689 GN=mhkA PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003041 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13843 all species →	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF00931 all species →	NB-ARC	NB-ARC domain	Domain	Interproscan
PF02816 all species →	Alpha_kinase	Alpha-kinase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029526 all species →	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR002182 all species →	Domain	NB-ARC	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR004166 all species →	Domain	Alpha-type protein kinase, alpha-kinase domain	Interproscan
IPR043529 all species →	Family	Alpha-protein kinase 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46747 all species →	ALPHA-PROTEIN KINASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043531 all species →	Molecular Function	ADP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0002753 all species →	Biological Process	cytoplasmic pattern recognition receptor signaling pathway	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0045087 all species →	Biological Process	innate immune response	Interproscan
GO:0048029 all species →	Molecular Function	monosaccharide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08868	ALPK; alpha-kinase	-	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.