Genomic Location: chr7:63604584...63619700
NR annotation: ABE66358.1, rhamnospondin 2, partial [Hydractinia symbiolongicarpus]
| CDS | ||||
| ANN18271-RA | ||||
| Transcript |
| ANN18271-RA |
| Protein |
| ANN18271-RA |
| Uniprot term | Description |
|---|---|
| P86177 | L-rhamnose-binding lectin CSL1 OS=Oncorhynchus keta OX=8018 PE=1 SV=1 |
| P35448 | Thrombospondin-1 OS=Xenopus laevis OX=8355 GN=thbs1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| PF12662 | cEGF | Complement Clr-like EGF-like | Domain | Interproscan |
| PF00629 | MAM | MAM domain, meprin/A5/mu | Domain | Interproscan |
| PF02140 | Gal_Lectin | Galactose binding lectin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR000998 | Domain | MAM domain | Interproscan |
| IPR026823 | Domain | Complement Clr-like EGF domain | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR043159 | Homologous_superfamily | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily | Interproscan |
| IPR000922 | Domain | D-galactoside/L-rhamnose binding SUEL lectin domain | Interproscan |
| IPR051830 | Family | Neurogenic locus notch homolog | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24033 | EGF-LIKE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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