Detailed information of ANN18469-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:16659397...16687159
NR annotation: XP_029213449.2, zinc phosphodiesterase ELAC protein 2-like isoform X1 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8HY87Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis OX=9541 GN=ELAC2 PE=2 SV=1
Q8CGS5Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus OX=10116 GN=Elac2 PE=1 SV=1
Q80Y81Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus OX=10090 GN=Elac2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002053 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13691
all species →		Lactamase_B_4tRNase Z endonucleaseDomainInterproscan
PF12706
all species →		Lactamase_B_2Beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR027794
all species →		DomaintRNase Z endonucleaseInterproscan
IPR047151
all species →		FamilyZinc phosphodiesterase ELAC protein 2-likeInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan
IPR013471
all species →		FamilyRibonuclease Z/BNInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12553
all species →		ZINC PHOSPHODIESTERASE ELAC PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0042781
all species →		Molecular Function3'-tRNA processing endoribonuclease activityInterproscan
GO:0072684
all species →		Biological Processobsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolyticInterproscan
GO:0016891
all species →		Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN18469-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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