Gene detail

Detailed information of ANN18492-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:17224781...17239947
NR annotation: CAH3193038.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN18492-RA

ATGGCGGACGACAGTTTACTGTTACTGTTTTGGACAGTTTTAGCTGTTTTATTCGGAATATTTGTGCTCTGGAAATATCTCAAACCCAGAAACAGCATCGTTCAGCAACTTTCCACGAGTCAAGAGTCCGAAAATGTGAAGAAAGCGCGACTCAAGTATTTTGCCGGTAGAGAGGAAATTGTTTCGAACAATGCCGAGGTTATCGCTCATGAAGTTAATACAAAACAGGAGAATGTTTTGGAAGAAGCAGTAAGCCAAGAGGAAAGAGAATCCGAATCAGCTGACACTAGTGTTGTTACTGAAGGTCTTCAACCTCCTGTGCGATACACTAAGTTGATTGGGGGACCAAGCAAAAAGTGTAGTGTCACGCACGAAAATGAAAATAGTGTTTTTGATCCCGATACTAGCGCTCCTATAACTCGACCTCTTAGAACACTAGAGGATGTTTTGTCATGGAGGCAAGGGTTTGACTTCTTCAACGTGGCTACAGTTTTGTTAACTGAACAAGGCAGAAAGTTGGAGAGAAGGCCCAGGACGCTTGTGTGTCACGACATGAAAGGAGGCTATATTGAAGATAGGTTTGTTCAAGGTGTCGACTCTGATGACTGTTACATTATATACCACTGGTACCTGATCGACATATTTGTGTACTTTAGTCATCATTTTGTTACCATACCTCCCCCGTGTTGGACCAATGCTGCACACACAAATGGTGTTCCAGTGTTGGGCACTGTTATTACAGAGCATGATGATGGCGCTGCACGATGCAGCCAGTTCTTGGAAGACACAGCATCATGGCAGAGTCTGGCTAATCAACTTGTTGACATAGCTGAGTATTACAGATTTGATGGTTGGCTTATAAACATAGAAAATCCTATTCAGCCAGTTCAAGTCAACAACCTAGAGGAATTTATGAAATATTTAACATCAGAGATGCACCAGCGAATACCCAATTCCCTTATTATTTGGTACGACAGCGTCACCTACAAAGGAGACCTTGCTTGGCAAGATGAACTCAATCCAAAGAACAGAATATTTTTTGATGCATGCGATGGTATCTTTTTGAACTACAACTGGTCCCAGGCACACTTGATGCGCTCTGTAGGTGCAGCTGGAAGAGATCACCAGCTGGATGTCTATGTTGGAGTGGATGTTTTTGGGCGTGGCTGCTTTGGAGGGGGAGGGTACAACTCTAAAGCGGCCTTGAAAGTGATAAGAGAGGAAAACTTGTCTGCCGCACTGTTTGCTCCTGGATGGGTAATGGAGACGCAAGGGTCCAAAAACTTCTTTGAGAATCAAGACAGGTTCTGGGGCCTTTTAGCTCCTTACTGTACAGTGCATGCAACAGTGGAAGCAATGCCATTTGTAACATCATTGTGTCGTGGCTGTGGAAAAACTGCCAACATAGATGGAAAGGTTGTTCTTTCCCAACCTTGGACAAATCTGAGTACCCAACAGTGTCAACCTACATTCATCAACACTTTCTTCAATCTGGGTACCAAGGCAGGTCTGGTCATTAATTCTGTAGAGTACACTATGGATGAGGCATACAATGGGGGCAGCTGCCTGTTAATCACTGGAAATGTTAACTCCTCCCAAGAAGTATCAAAGAGTGTTGTAAGACTGTTCAAGACTGAAATACACATAAAAGGACCACTACTGTTATCATTCACCTTCAAGCTGGATCCTAAATGTTGCATAGATGTGGCATTACAGTTGCACACTAACAAGATTCCAACATATCTGCTACTTTGTCCAGAGACATCAGATGATCAAGGGTCTAGTGCAGAGGATTCTGATTCAAATAGTAAGATGATTCATCGTTATGGCATTCCAAAGTCAAGGACGTTGTCATCATCAGCGTTCATGTCTCCCATTGGTCCAGAACACTATAGACTGTTTGAACCTCTGGCCGGTGATTTCCACAACATAGTACAGCAGGCTCAAGGCTCGAGAGAGAAAGATGAGGATGGTGTGACATGGTGTACACGACATTATTTGATTGCTGAAAAAGAATTGCTTGGCCACGTGGTGCAAGAAGTCAGACTGATTTGCGCTGTTTCTCCCGGTGTGGAATCCTCAGGAGCATTCAAACTTCACTTAGGAGAAATTAAGATTGTTGATCCACAAGTTCTCAAACAGCCTCTAGCATCTGCACGAAACATCAGATGCCTCGACTTGAAGTGGAAGTCAACTGACCAAGAATACCTCTTGAGCCTCACTCTTATGTGGGACTGTCCAATCAGAGATGGGCAGGTTGATGATCCTGCGTACTACAATATTTTCAGAACGACACAGGATTCTAACATATTTCTAGGCCGAGCTTTTGTGGAGGCATACCGAGTTTGTCAGATACCTGTTTCGAAAACCTGTTCCTCCGTGGAATTTATCGTGCAGCCACTGGGTCGGATCCCTAAGGATCATAGCAAGACCCCAACTACGCTTCAGAGACGTCTGCAAGAGAGACATGAGGACCGTGAACATGGACCTGAAAACCTGGAAGCCTTAGCCTCAAAACGACCGGCCTGGCGTCAGACGGTACAGAAGGGCCTCTCCAAGTTTGAAGAGACGCTTGTCCAACAGTCCGAGCTGCGAAGAGACTGA

Transcript

ANN18492-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BX80	Cytosolic endo-beta-N-acetylglucosaminidase OS=Mus musculus OX=10090 GN=Engase PE=1 SV=1
Q8NFI3	Cytosolic endo-beta-N-acetylglucosaminidase OS=Homo sapiens OX=9606 GN=ENGASE PE=1 SV=1
A1L251	Cytosolic endo-beta-N-acetylglucosaminidase OS=Danio rerio OX=7955 GN=engase PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003477 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03644 all species →	Glyco_hydro_85	Glycosyl hydrolase family 85	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032979 all species →	Family	Cytosolic endo-beta-N-acetylglucosaminidase	Interproscan
IPR005201 all species →	Domain	Glycoside hydrolase, family 85	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13246 all species →	ENDO BETA N-ACETYLGLUCOSAMINIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0006517 all species →	Biological Process	protein deglycosylation	Interproscan
GO:0033925 all species →	Molecular Function	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01227	ENGASE; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	EC:3.2.1.96	Other glycan degradation	ko00511	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.